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The AmoyDx® Comprehensive Panel is a next-generation sequencing-based test capable of detecting a wide range of alterations.
 
Tumor microsatellite instability (MSI) or mismatch repair (MMR) status serves as a predictive pan-cancer marker for response to immune checkpoint inhibitor therapy. NGS-based MSI testing across various cancer types offers both flexibility and accuracy, facilitating the incorporation of MSI status into decision-making processes and prediction of immune checkpoint blockade therapy efficacy.
Genetic polymorphisms in genes encoding bolizing enzymes and drug transporters can impact drug efficacy and toxicity. Identifying these genetic variations can help identify individuals predisposed to a high risk of toxicity and low response to standard doses of anti-cancer drugs.
Mutations in the BRCA1 and BRCA2 genes confer genetic predisposition to breast and ovarian cancers. The AmoyDx® Comprehensive Panel also detects BRCA1/2 mutations, allowing for the identification of candidates suitable for PARP inhibitor therapy.

Mutations( Hover over each mutational type to highlight genes covered )

All
CNV
FUSIONS
SNP
SNV/INDELS
AKT1

AKT1

SNV/INDELS
AKT2

AKT2

CNV
SNV/INDELS
AKT3

AKT3

CNV
SNV/INDELS
ALK

ALK

FUSIONS
SNV/INDELS
APC

APC

SNV/INDELS
AR

AR

SNV/INDELS
ARAF

ARAF

SNV/INDELS
ARID1A

ARID1A

SNV/INDELS
ATM

ATM

SNV/INDELS
ATR

ATR

SNV/INDELS
AURKA

AURKA

CNV
SNV/INDELS
BAP1

BAP1

SNV/INDELS
BCL2L11

BCL2L11

SNV/INDELS
BRAF

BRAF

FUSIONS
SNV/INDELS
BRCA1

BRCA1

SNV/INDELS
BRCA2

BRCA2

SNV/INDELS
CCND1

CCND1

CNV
SNV/INDELS
CCNE1

CCNE1

CNV
SNV/INDELS
CD274

CD274

CNV
SNV/INDELS
CDK12

CDK12

SNV/INDELS
CDK4

CDK4

CNV
SNV/INDELS
CDK6

CDK6

CNV
SNV/INDELS
CDKN2A

CDKN2A

SNV/INDELS
CDKN2B

CDKN2B

SNV/INDELS
CREBBP

CREBBP

SNV/INDELS
CTNNB1

CTNNB1

SNV/INDELS
DDR2

DDR2

SNV/INDELS
EGFR

EGFR

CNV
SNV/INDELS
EIF1AX

EIF1AX

SNV/INDELS
EPAS1

EPAS1

CNV
SNV/INDELS
EPCAM

EPCAM

SNV/INDELS
ERBB2

ERBB2

CNV
SNV/INDELS
ERBB3

ERBB3

SNV/INDELS
ERBB4

ERBB4

SNV/INDELS
ESR1

ESR1

SNV/INDELS
ETS2

ETS2

SNV/INDELS
FANCA

FANCA

SNV/INDELS
FBXW7

FBXW7

SNV/INDELS
FGF19

FGF19

CNV
SNV/INDELS
FGF3

FGF3

CNV
SNV/INDELS
FGFR1

FGFR1

CNV
FUSIONS
SNV/INDELS
FGFR2

FGFR2

CNV
FUSIONS
SNV/INDELS
FGFR3

FGFR3

CNV
FUSIONS
SNV/INDELS
FGFR4

FGFR4

SNV/INDELS
FLCN

FLCN

SNV/INDELS
FLT3

FLT3

SNV/INDELS
GNAS

GNAS

SNV/INDELS
HIF1A

HIF1A

CNV
SNV/INDELS
HRAS

HRAS

SNV/INDELS
IDH1

IDH1

SNV/INDELS
IDH2

IDH2

SNV/INDELS
IGF1R

IGF1R

CNV
SNV/INDELS
JAK1

JAK1

SNV/INDELS
JAK2

JAK2

SNV/INDELS
JAK3

JAK3

SNV/INDELS
KDM5C

KDM5C

SNV/INDELS
KDR

KDR

SNV/INDELS
KIT

KIT

SNV/INDELS
KRAS

KRAS

SNV/INDELS
MAP2K1

MAP2K1

SNV/INDELS
MAPK1

MAPK1

CNV
SNV/INDELS
MET

MET

CNV
SNV/INDELS
MLH1

MLH1

SNV/INDELS
MRE11

MRE11

SNV/INDELS
MSH2

MSH2

SNV/INDELS
MSH6

MSH6

SNV/INDELS
MTOR

MTOR

SNV/INDELS
MYC

MYC

CNV
SNV/INDELS
NF1

NF1

SNV/INDELS
NF2

NF2

SNV/INDELS
NOTCH1

NOTCH1

SNV/INDELS
NRAS

NRAS

SNV/INDELS
NRG1

NRG1

FUSIONS
NTRK1

NTRK1

FUSIONS
SNV/INDELS
NTRK2

NTRK2

FUSIONS
SNV/INDELS
NTRK3

NTRK3

CNV
FUSIONS
SNV/INDELS
PALB2

PALB2

SNV/INDELS
PAX8

PAX8

FUSIONS
SNV/INDELS
PDCD1

PDCD1

SNV/INDELS
PDGFRA

PDGFRA

CNV
SNV/INDELS
PGR

PGR

CNV
SNV/INDELS
PIK3CA

PIK3CA

CNV
SNV/INDELS
PIK3R1

PIK3R1

SNV/INDELS
PMS2

PMS2

SNV/INDELS
POLD1

POLD1

SNV/INDELS
POLE

POLE

SNV/INDELS
PSMD4

PSMD4

CNV
SNV/INDELS
PTCH1

PTCH1

SNV/INDELS
PTEN

PTEN

SNV/INDELS
RAF1

RAF1

SNV/INDELS
RASA1

RASA1

SNV/INDELS
RASAL1

RASAL1

SNV/INDELS
RB1

RB1

SNV/INDELS
RET

RET

CNV
FUSIONS
SNV/INDELS
RICTOR

RICTOR

CNV
SNV/INDELS
RIT1

RIT1

SNV/INDELS
ROS1

ROS1

FUSIONS
SNV/INDELS
RSF1

RSF1

CNV
SNV/INDELS
SF3B1

SF3B1

SNV/INDELS
SMAD4

SMAD4

SNV/INDELS
SMARCA4

SMARCA4

SNV/INDELS
SMO

SMO

CNV
SNV/INDELS
STK11

STK11

SNV/INDELS
TERT

TERT

SNV/INDELS
TOP2A

TOP2A

CNV
SNV/INDELS
TP53

TP53

SNP
SNV/INDELS
TSC1

TSC1

SNV/INDELS
TSC2

TSC2

SNV/INDELS
TSHR

TSHR

SNV/INDELS
VHL

VHL

SNV/INDELS
ABCB1

ABCB1

SNP
C8orf34

C8orf34

SNP
CDA

CDA

SNP
CYP19A1

CYP19A1

SNP
CYP2D6

CYP2D6

SNP
DPYD

DPYD

SNP
DYNC2H1

DYNC2H1

SNP
ERCC1

ERCC1

SNP
GSTP1

GSTP1

SNP
MTHFR

MTHFR

SNP
MTRR

MTRR

SNP
SEMA3C

SEMA3C

SNP
SLC28A3

SLC28A3

SNP
SOD2

SOD2

SNP
UGT1A1

UGT1A1

SNP
UMPS

UMPS

SNP
XPC

XPC

SNP
XRCC1

XRCC1

SNP

Target 128 genes on tumor actionable variants

Target 128 genes on tumor actionable variants

Detection of SNV, Indel, fusion, CNV

Detection of SNV, Indel, fusion, CNV

Fast turnaround time within 1 week

Fast turnaround time within
1 week

Automatic and secure data analysis

Automatic and secure data analysis

Specifications

Target regions
128 genes and MSI
Alterations detected
SNV, InDel, Fusion, CNV, SNP, MSI
CNV and MSI detection are for tissue sample only.
Sample type
FFPE tumor tissue, liquid biopsy
DNA input
FFPE DNA: optimal 100 ng (minimum 50 ng)
Plasma cfDNA: optimal 30 ng (minimum 10 ng)
Sequencer
Illumina NextSeq 500, NovaSeq 6000
TAT for library preparation
2 days (hands-on time: 4 hours )
TAT from sample to report
5 days

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